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Fundamental Concepts of Bioinformatics is the first textbook co-authored by a biologist and computer scientist that is specifically designed to make bioinformatics accessible to undergraduates and prepare them for more advanced work. Students learn what programs are available for analyzing data, how to understand the basic algorithms that underlie these programs, what bioinformatic research is like, and other basic concepts. Information flows easily from one topic to the next, with enough detail to support the major concepts without overwhelming students. Problems at the end of each chapter use real data to help students apply what they have learned so they know how to critically evaluate results from both a statistical and biological point of view. |
Available at Addison Wesley and Benjamin Cummings
Instructor Resources
- Tutorial slides: A very large (~10MB) PowerPoint file comprising a tutorial of many of the concepts from the textbook. Presented by Dr. Raymer at OCCBIO 2006. Tutorial.ppt
- Graphics and Figures: Here are all of the figures from the text, in JPEG format, as a single zipped file(8.3MB).
- Powerpoint slides: Here are some of our lecture slides for various topics from the text:
- A Gentle Introduction to the Essential Chemistry of Bioinformatics for Computer Scientists
- Sequence Alignments
- Introduction to Proteins
- Protein Structure, Function, and Folding
- Protein Alignment Scoring -- PAM and BLOSUM
- Example Protein Folds
- Database Searches
- Sequence Assembly
- Physical Mapping of DNA
- Analyzing Algorithms and Asymptotic Notation
- Web Resources:
- Perl Programming Resources



Textbook