WSU BiRG

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Home Publications

Publications

Year: 2011
  • Krane, D., Heizer, E. M. & Raymer, M. (2011). Amino Acid Biosynthetic Cost and Protein Conservation. Journal of Molecular Evolution, Accepted, April 2011. [More]
Year: 2010
  • Anderson, P. (2010). Algorithmic Techniques Employed in the Quantification and Characterization of Nuclear Magnetic Resonance Spectroscopic Data. Phd Thesis, Wright State University. [More]
  • Anderson, P., Manjunatha, A., Ranabahu, A. H., DelRaso, N. J., Reo, N. V., Sheth, A. P. et al (2010a). Cloud-based Map-Reduce Architecture for Nuclear Magnetic Resonance based Metabolomics. In Proceedings of the 7th Microsoft Research eScience Workshop. [More]
  • Anderson, P., Mahle, D. A., Doom, T., Reo, N. V., DelRaso, N. J. & Raymer, M. (2010b). Dynamic Adaptive Binning: An improved quantification technique for NMR spectroscopic data. Metabolomics, Accepted. [More]
  • Mahle, D., Anderson, P., DelRaso, N., Raymer, M., Neuforth, A. & Reo, N. (2010). A Generalized Model for Metabolomic Analysis: Application to Dose and Time Dependent Toxicity. Metabolomics, 2, 206. [More]
  • Mahle, D. A., Anderson, P., Gearhart, J. M. & Reo, N. V (2010). Effect of Low Level Exposure to Diisopropylfluorophosphate (DFP) on Regional Brain Metabolism in F344 Rats. In 49th Society of Toxicology Meeting. Salt Lake City, UT. [More]
  • Manjunatha, A., Anderson, P., Sahoo, S., Ranabahu, A. H., Raymer, M. & Sheth, A (2010a). Semantically Annotated RESTful Services for Large-scale Metabolomics Data Analysis. In The 5th Annual Ohio Collaborative Conference on Bioinformatics (OCCBIO). Columbus, OH. [More]
  • Manjunatha, A., Anderson, P., Sahoo, S., Ranabahu, A. H., Raymer, M. & Sheth, A (2010b). Cloud Based Scientific Workflow for NMR Data Analysis. In 18th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB). Boston, MA. [More]
  • Paoletti, D., Krane, D., Doom, T. & Raymer, M. (2010). Inferring the Number of Contributors to Mixed DNA Profiles. IEEE Transactions on Computational Biology and Bioinformatics, In Press. [More]
  • Raiford, D., Krane, D., Doom, T. & Raymer, M. (2010). Automated Isolation of Translational Efficiency Bias that Resists the Confounding Effect of GC(AT)-Content. IEEE/ACM Transactions on Computational Biology and Bioinformatics, 7, 238-250. [More]
Year: 2009
  • Anderson, P., Hodson, N., Kelly, B., Reo, N., DelRaso, N., Doom, T. et al (2009a). A web-based framework for the distribution of bioinformatics techniques: Orthogonal projection on latent structures and principal component analysis implemented as RESTful web services. In 2009 Ohio Collaborative Conference on Bioinformatics. [More]
  • Anderson, P., Raymer, M., Kelly, B., Reo, N., DelRaso, N. & Doom, T. (2009b). Characterization of 1H NMR spectroscopic data and the generation of synthetic validation sets. Bioinformatics, 25(22), 2992-3000. [More]
  • Cooper, G. (2009). Improving Remote Homology Detection Using a Sequence Property Approach. Phd Thesis, Wright State University. [More]
  • Cooper, G. & Raymer, M (2009). Improving Remote Homology Detection Using Sequence Properties and Position Specific Scoring Matrices. In The 2009 International Conference on Bioinformatics and Computational Biology (BIOCOMP 09). [More]
  • Hanes, A. (2009). Investigation and quantification of codon usage bias trends in prokaryotes. Master Thesis, Wright State University, Dayton, OH. [More]
  • Hanes, A., Raymer, M., Doom, T. & Krane, D (2009). A comparison of codon usage trends in prokaryotes. In Proceedings of Ohio Collaborative Conference on Bioinformatics (OCCBIO) 2009. Cleveland, OH. [More]
  • Kelly, B. (2009). Computational Analysis of Metabolomic Toxicological Data Derived from NMR Spectroscopy. Master Thesis, Wright State University. [More]
  • Krane, D., Bahn, V., Balding, D., Barlow, B., Cash, H., Desportes, B. et al. (2009). Time for DNA Discolsure. Letter to Science. [More]
  • Raiford, D., Krane, D., Doom, T. & Raymer, M. (2009). A Genetic Optimization Approach for Isolating Translational Efficiency Bias. IEEE/ACM Transactions on Computational Biology and Bioinformatics, In press. [More]
Year: 2008
  • Anderson, P., Reo, N. V., DelRaso, N. J. & Raymer, M (2008). Gaussian binning for processing NMR spectroscopic data for metabolomics. In U.S. Army Center for Health Promotion and Preventive Medicine 11th Annual Force Health Protection Conference. [More]
  • Anderson, P., Reo, N., DelRaso, N., Doom, T. & Raymer, M. (2008). Gaussian binning: a new kernel-based method for processing NMR spectroscopic data for metabolomics. Metabolomics, 4(3), 261-272. [More]
  • Peterson, M. (2008). Evolutionary Methodology for Optimization of Image Transforms Subject to Quantization Noise. Phd Thesis, Wright State University, 3640 Colonel Glenn Hwy, Dayton OH, 45435-0001. [More]
  • Raiford, D. (2008). Algorithmic Techniques Employed in the Isolation of Codon Usage Biases in Prokaryotic Genomes. Phd Thesis, Wright State University, 3640 Colonel Glenn Hwy, Dayton OH, 45435-0001. [More]
  • Raiford, D., Heizer, E. M., Miller, R. V., Akashi, H., Raymer, M. & Krane, D. (2008). Do amino acid biosynthetic costs constrain protein evolution in Saccharomyces cerevisiae?. Journal of Molecular Evolution, 67(6), 621-630. [More]
Year: 2007
  • Gilder, J., Doom, T., Inman, K. & Krane, D. (2007). Run-specific limits of detection and quantitation for STR-based DNA testing. Journal of Forensic Sciences, 52(1), 97-101. [More]
Results 1 - 25 of 78
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